Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDLQKYQGIIPAFYACYDDKGDICPERVKALTNYFIDKGVQGLYVNGSSGECIYQSVADRKLVLENVMSVAKGKLTVIAHVACNNTKDSVELAMHAEAIGVDAIAAIPPIYFRLPEYAIADYWNTISQAAPQTDFIIYNIPQLAGVALTSDLYRKMLQNPQVIGVKNSSMPVQDIQNFVAIGGENH--IVFNGPDEQFLGGRLMGAAAGIGGTYGVMPELYLTLNQLIVDKDLEKARELQFTINDIITKLCSGHGNMYAVIKSVLEINEQLTIGSVRLPLASVTEEDKPIIKEAAEMIRHAKKQFC |
| 4BWL Chain:D ((13-302)) | -------RGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVANIPALSGVKLTLDQINTLVTLPGVGALKQTS---GDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLIK--TGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194082 for 2538 contacts (-76.5/contact) +
2D Compatibility (PS) -31099 + (NN) -15533 + (LL) 1216
1D Compatibility (HY) -22400 + (ID) 4650
Total energy: -266548.0 ( -105.02 by residue)
QMean score : 0.594
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