Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIKVYKPTTNGRRNMTSLDFAEITTNTPEKSLLVSLKNKAGRNNNGRITVRHQGGGHKRHYRLIDFKRNKDG-VEAVVKTIEYDPNRTANIALVHYTDGVKAYILAPKGLEVGQ-RII-SGPEADIKVGNALPLANIPVGTVIHNIELQPGKGAELIRAAGASAQVLGQEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRNRWKGVRPTVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNQK |
| 1RL2 Chain:A ((60-125)) | ------------------------------------------------------------QYRIIDFKRDKD-GIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVG-MEI-MSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEVG--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23702 for 345 contacts (-68.7/contact) +
2D Compatibility (PS) -6678 + (NN) -3526 + (LL) 8068
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -33638.0 ( -97.50 by residue)
QMean score : 0.406
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