Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
1WLO Chain:A ((1-136))
MVPPKLKQALELFKSLPKELRSQVLLEYAAKVPPPPPGV--------ELERVHECQTPFFVHADVEGGKVRLYFHVPDE-----------------APTVKAFAGLLREGLEGESPEAVLEVPPGFYRGYGLEEFFTPLRLRGLEAALLRLQAQVRKALTS
General information:
TITO was launched using:
RESULT:
Template:
1WLO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8511 for 1052 contacts (-8.1/contact) +
2D Compatibility (PS) -13831 + (NN) 692 + (LL) 2676
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -21274.0 ( -20.22 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_1WLO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WLO-query.scw
PDB file :
Tito_Scwrl_1WLO.pdb
: