Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYHIELKKEALLPRERLVDLGADRLSNQELLAILLRTGIKEKPVLEISTQILENISSLADFGQLSLQELQSIKGIGQVKSVEIKAMLELAKRIHKAEYDRKEQILSSEQLARKMMLELGDKKQEHLVAIYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDLSFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREEADIL
2QLC Chain:A ((1-126))
---------------------------------------------------------------------------------------------------MNLKVKGARDVFEYMKGRIPDETKEHLFVLFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL-
General information:
TITO was launched using:
RESULT:
Template:
2QLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75718 for 956 contacts (-79.2/contact) +
2D Compatibility (PS) -13008 + (NN) -3682 + (LL) 9224
1D Compatibility (HY) -10400 + (ID) 2350
Total energy: -95934.0 ( -100.35 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_2QLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QLC-query.scw
PDB file :
Tito_Scwrl_2QLC.pdb
: