Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKIYLNKCRFYGYHGAFSEEQTLGQVFQVDAVLSLDLAKASQTDDLIDTVHYGEVFDCIKNHVENEQYQLIEKLAGVIVEDIFLQFHPVQAITLKITKDNPPINGHYESVGIELERKRV
2CG8 Chain:A ((1-119))
MDQLQIKDLEMFAYHGLFPSEKELGQKFIVSAILSYDMTKAAT-------VHYGELCQQWTTWFQETSEDLIETVAYKLVERTFESYPLVQEMKLELKKPWAPVHLSLDTCSVTIHRRKQ
General information:
TITO was launched using:
RESULT:
Template:
2CG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75828 for 781 contacts (-97.1/contact) +
2D Compatibility (PS) -11635 + (NN) -3412 + (LL) 256
1D Compatibility (HY) -12000 + (ID) 1800
Total energy: -104419.0 ( -133.70 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_2CG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CG8-query.scw
PDB file :
Tito_Scwrl_2CG8.pdb
: