Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIAAMEEELKLLVENLEDKSQETVLS-NVYYSGRYGEHELVLVQSGVGKVMSAMSVAILVESFKVDAIINTGSAGAVATGLNVGDVVVADTLVYHDVDLTAFGYDYGQMSMQPLYFHSDKTFVSTFEAVLSKEEMTSKVGLIATGDSFIAGQEKIDVIKGHFPQVLAVEMEGAAIAQAAQATGKPFVVVRAMSDTAAHDANITFDEFIIEAGKRSAQVLMAFLKAL
4BMX Chain:B ((24-247))
-KIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVAIQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKEVANEQHIVLKEGVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFL----EKSAQTSAKFLKSM
General information:
TITO was launched using:
RESULT:
Template:
4BMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168482 for 2018 contacts (-83.5/contact) +
2D Compatibility (PS) -23864 + (NN) -7014 + (LL) 348
1D Compatibility (HY) -18000 + (ID) 3850
Total energy: -220862.0 ( -109.45 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_4BMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMX-query.scw
PDB file :
Tito_Scwrl_4BMX.pdb
: