Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNLRNRSFLTLLDFSTAEVEFLLKLSEDLKRAKYAGIEQQKLVG-KNIALIFEKDSTRTRCAFEVAAHDQGAHVTYLGPTGSQMGKKETSKDTARVLGGMYDGIEYRGFSQETVETLAEFSGVPVWNGLTDADHPTQVLADFLTAKECLHKPYKDIRFTYVGDGRNNVANALMIGASIVGMTYHLVCPKELEPDPELLSKCQEIAKTTGASIEITADIAEGVRDSDVLYTDVWVSMGEPDEVWKERIALLEPYRITQEMLNMTENPNVIFEHCLPSFHNIDTKVGYDIYEKYGLKEMEVSDEVFEGPHSVVFQEAENRMHTIKAVMVATLGD |
2I6U Chain:A ((3-304)) | ------RHFLRDDDLSPAEQAEVLELAAELKKDP---VSRRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAE-RKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQEND-GLDRVKPFRPFQLNSRLLALADSDAIVL-HCLPA-HRGD----------------EITDAVMDGPASAVWDEAENRLHAQKALLVWLLER |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2I6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151707 for 2766 contacts (-54.8/contact) +
2D Compatibility (PS) -32770 + (NN) -18862 + (LL) 2024
1D Compatibility (HY) -22000 + (ID) 5750
Total energy: -229065.0 ( -82.81 by residue)
QMean score : 0.509
|
|
|