Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKADKALLIVDMINNFEFDMGETLAKKTEKIVPHILSLKEHARQNEWPIIYINDHYGLWQADI----K-NIQQEC-TNERSKDIITKIAPVDADYFLIKPKHSAFYETALHTLLTELQVRHIIITGIAGNICVLFTANDAYMREYSITIPKDCIASNSDEDNEFALTMMENVLFAEITTEEQIIEK
3TXY Chain:A ((11-191))
--NPTVALVAIDLQNGIVVLP--MVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWSTDAQTFALTQIFP-KLGQVATAADVEA-
General information:
TITO was launched using:
RESULT:
Template:
3TXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115016 for 1429 contacts (-80.5/contact) +
2D Compatibility (PS) -18266 + (NN) -2712 + (LL) 368
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -144726.0 ( -101.28 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_3TXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TXY-query.scw
PDB file :
Tito_Scwrl_3TXY.pdb
: