Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAATMQRPWDHYKGMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGAATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPKPKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGHPLLGWDTD-EFPTDLYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIYAHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGIGLEIIEGRANFHTLEQYALNHKSIKNESGRQEKLKAILNQYILEV
4A8N Chain:A ((10-306))-------------------------------------------------RFTFGLW-TVGWQGRDPFGDATRR-----------ALDPVESVRRLAE-LGAHGVTFHDDDLIPFGSSDSEREEHVKRFRQALDD----TGMKVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAETYVAWGGREGAESGGAKDVRDALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLN-GQNGIKYDQDLRFGAGDLRAAFWLVDLLESAGY-SGPRHFDFKPPRT--EDFDGVWASAAGC-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4A8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1591 -103768 -65.22 -350.57
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -65.22
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_4A8N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A8N-query.scw
PDB file : Tito_Scwrl_4A8N.pdb: