Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIVKATDQSFSAET--SEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL
2TRX Chain:B ((4-107))--IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL


General information:
TITO was launched using:
RESULT:

Template: 2TRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 436 4631 10.62 45.40
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : 10.62
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.718

(partial model without unconserved sides chains):
PDB file : Tito_2TRX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2TRX-query.scw
PDB file : Tito_Scwrl_2TRX.pdb: