Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------------------------------------------------------MEKEAFMEKLLSFMKEEAYKP----LTVQELEEMLNITEAEEFKELVKALVALEEKGLIVR--TRSDRYGIPEKMNLIKGKISAHAKGF--AFLLPEDTSLSDVFIPPNELNTAMNGDIVMVRLNSQS-----------------------------------------------SGSRQEGTVIRILERAIQRVVGTYTET--------RNFGFVIPDDKKITSDIFIPKNGKNGAAEGHKVVVKLTSYPEGRMNAEGEVETILGHKNDPGIDILSVIHKHGLP-GEFPADAME-------------QASSTPDTIDEKDLKDRRDLRDQVIVTIDGADAKDLDDAVTVTKLDDGSYKLGVHIADVSHYVTENSPIDKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQGQVTEHEIFQSVIKTTERMTYSDVNKILVDDDEELKQKYEPLVPMFKDMERLAQILRDKRMDRGAVDFDFKEAKVLVDDE-GAVKDVVIRERSVAEKLIEEFMLVANETVAEHFHWMNVPF-IYRIHEEPNAEKLQKFLEFVTTF-GYVVKGTAGNIHPRALQSILDAVRDRPEETVISTVMLRSMKQAKY------DPQSLGHFGLSTEFYTHFTSPIRRYPDLIVHRLIRTYLINGKVDEATQEKWAERLPDIAEHTSSMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPN-TIEGLVHVSFM--TDDYYRFDEQHFAMI----GERTGNVFRIGDEITVKVVDVNKDERNIDFEIVGMKGTPRRPRELDSSRSRKRGKPARKRVQSTNTPVSPAPSEEKGEWFTKPKKKKKKRGFQNAPKQKRKKKK
2WP8 Chain:J ((12-977))VREHYLRSDIPCLSRSCTKCPQIVVPDAQNELPKFILSDSPLELSAPIGKHYVVLDTNVVLQAIDLLENPNCFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRDSDDHKRFIVFHNEFSEHTFVENDRNDRAIRKTCQWYSEHLKPYDINVVLVTNDESNIITKSLVQYIELLPNADDIRDSFTFPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGDQVIVELLPQSEWKAPSSIVLDSEHFDVNDNPDIENTTVISDKQRRLLAKDAMIAQRSKKIQPTAKVVYIQRRSWRQYVGQLAPSSVDPQSSSTQNVFVILMDKCLPK--VRIRTRRAAELLDKRIVISIDSWPTTHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRIDD-----KTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLDRCVDP-EDPYFNTLVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRD--KNKMDMICRNINRKHRNAQFAGRASIEYYVGQVMRNN-ESTETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVFDKVEVQVRSVMDPITSKRKAELLLK--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2WP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 3280 117219 35.74 167.46
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain J : 0.69

3D Compatibility (PKB) : 35.74
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_2WP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WP8-query.scw
PDB file : Tito_Scwrl_2WP8.pdb: