Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLLAAGIIGLLTVSIASPSFAAEKQADTNVAVLFDGSGSMVQKTGGERKIDIAKKSVKSFAELL---PKDTNLMLRVFGHAGNNKLS-GKALSCSTTETIYGLHPYEGSLFDNSLSELKPTGWTPIAKALADTRKEFEAFDADGKNVVYLITDGEETCGGDPAAEIEKLRASNVDTIVNIIGFNFDVKGNEEMKQAAVAGG-GEYISANSADEFEQAWEKEAQKFTE----
1Q0P Chain:A ((15-223))----------------------------SMNIYLVLDGSDSI-----GASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDL--------LYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVFKVKDLS


General information:
TITO was launched using:
RESULT:

Template: 1Q0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 886 -1856 -2.09 -10.14
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -2.09
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_1Q0P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q0P-query.scw
PDB file : Tito_Scwrl_1Q0P.pdb: