Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLSDRDLRAEISSGRLGIDPFDDT-LVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPV--------DGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNFIRST
1XS6 Chain:D ((1-189))
MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLAFYNSGKLPLALRPGMLIGALSFEPLSGPAVRPY-NRREDAKYRNQQGAVASR---------
General information:
TITO was launched using:
RESULT:
Template:
1XS6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76772 for 1269 contacts (-60.5/contact) +
2D Compatibility (PS) -19413 + (NN) -10804 + (LL) 392
1D Compatibility (HY) -12000 + (ID) 4050
Total energy: -122647.0 ( -96.65 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1XS6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XS6-query.scw
PDB file :
Tito_Scwrl_1XS6.pdb
: