Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGE-GAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
4DSD Chain:A ((14-68))
----------------------------------------LPARNFINSNFTKPQVAHIKIDKDMMESTKYEVVLMD--G--TEIDFDSKGNWEEVSAK-----
General information:
TITO was launched using:
RESULT:
Template:
4DSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12645 for 318 contacts (-39.8/contact) +
2D Compatibility (PS) -6063 + (NN) -5110 + (LL) 1536
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -24632.0 ( -77.46 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4DSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DSD-query.scw
PDB file :
Tito_Scwrl_4DSD.pdb
: