Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRALGK
3HPR Chain:A ((1-182))
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEA----GINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDGTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYY--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38583 for 1137 contacts (-33.9/contact) +
2D Compatibility (PS) -16583 + (NN) -12334 + (LL) 2684
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -83316.0 ( -73.28 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3HPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HPR-query.scw
PDB file :
Tito_Scwrl_3HPR.pdb
: