Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTAAGLSGIDLTDLDNFADGFPHHLFAIHRREAPVYWHRPTEHTPDGEGFWSVATYAETLEVLRDPVTYSSVTGGQRRFGGTVLQDLP------VAGQVLNMMDDPRHTRIRRLVSSGLTPRMIRRVEDDLRRRARGLLDGVEP-GAPFDFVVEIAAELPMQMICILLGVPETDRHWLFEAVEPGFDFRGSRRATMPRLNVEDAGSRLYTYALELIAGKRAEPADDMLSVVANATIDDPDAPALSDAELYLFFHLLFSAGAETTRNSIAGGLLALAENPDQLQTLRSDFELLPTAIEEIVRWT--SPSPSKRRTASRAVSLGGQPIEAGQKVVVWEGSANRDPSVFDRADEFDITRKPNPHLGFGQGVHYCLGANLARLELRVLFEELLSRFGSVRVVEPAEWTRSNRHTGIRHLVVELRGG |
| 2Y46 Chain:C ((51-400)) | ----------------------------------PVSRVRP----PYGEEAWLVTRYEDVRAVLGD---------GRFVRGPSMTRDEPRTRPEMVKGGLLSM-DPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSAD-HDRFTRWSGAF----LSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQAR-DQQDS--LSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLR----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167588 for 2671 contacts (-62.7/contact) +
2D Compatibility (PS) -37004 + (NN) -24212 + (LL) 3784
1D Compatibility (HY) -19600 + (ID) 6800
Total energy: -251420.0 ( -94.13 by residue)
QMean score : 0.531
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