Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGP-DGVLRPTHCGATLIAGLD-M--DSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGG-------RVLQPLGLHKVANPDLCGFAG---ESLGFT-SGGVRLTRTKTRP-YL--GDLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGA-GYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
| 2D6F Chain:A ((85-419)) | ------AEDPELPDVSIISTGGTVASIIDYRTGAVHPAFTADDLLRANPELLDIANIRGRAVFNILSENMKPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFMLRTPVPVVFTGAQRSSDRPSSDASLNIQCSVRAATSE---IAEVTVCMHATMDDLSCHLHRGVKVRKMHTSRRDTFRSMNALPLAEVTPDGIKILEENYRKRGSDELELSDRVEERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGLGHCPDTLIPVIGEAH-DMGVPVAM--TSQCLNGRVNMNVYSTGRRLLQAGVIPCDDMLPEVAYVKMCWVLGQTDDPEMAREMMREN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210731 for 2776 contacts (-75.9/contact) +
2D Compatibility (PS) -34938 + (NN) -20207 + (LL) 988
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -284688.0 ( -102.55 by residue)
QMean score : 0.413
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