Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDK--PTRIEDYTYLRHVEWVTSWFENLDLHD-VTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFLPAAQGRTPLPFYVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWDKPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIKASHFIQEDSGTELAERMLSWQQAT |
2O2I Chain:A ((12-144)) | --------------------PKYLEIAGK-----RMAYIDEGKGDA--IVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV------TPMTWADW---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104245 for 954 contacts (-109.3/contact) +
2D Compatibility (PS) -13715 + (NN) -4051 + (LL) 8548
1D Compatibility (HY) -14000 + (ID) 2700
Total energy: -130163.0 ( -136.44 by residue)
QMean score : 0.445
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