Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGYLSADRLADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKLEVVADVRPEVVSFTFGAPPPDVVQRLSALGLLVSITVTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLDRIGSAHDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLG-YPEVHQMTKPIRAAAVQADDPHGTNLWAGSAHRKTRPG-PAADIIASLTPDVCSA |
3BO9 Chain:A ((19-316)) | -VTDLLEIEHPILMGGMAW-AGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSPW-----------------------------------ADDLVKVCIEEKVPVVTFGAGNP-TKYIRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIGEV---------TTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKIVKASIRDTVVTGAKLGHPARVLRTPFARKIQEMEFENPMQAEEMLVGSLRRAV-VEGDLERGSFMVGQSAGLIDEIKPVKQIIEDILKEFKET |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176076 for 2793 contacts (-63.0/contact) +
2D Compatibility (PS) -32739 + (NN) -20566 + (LL) 2504
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -246177.0 ( -88.14 by residue)
QMean score : 0.493
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