Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDLSQRLAGRVAVITGGGSGIGLAAGRRMRAEGATIVV---GDV----DVEAGGAAADELSGLFVPTDVCDEDAVNGLFDGAAETYGRIDIAFNNAGISPPEDNLIENTELAAWQRVQDVNLKSVYLCCRAALRHMVLAGKGSIVNTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQE----LFAKN---PERAARRMV--HVPLGRFAEPDEIAAAVAFLASDDASFITASTFLVDGGISSAYVTPL
2ZTL Chain:D ((2-259))
-------LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA------
General information:
TITO was launched using:
RESULT:
Template:
2ZTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154254 for 2055 contacts (-75.1/contact) +
2D Compatibility (PS) -26542 + (NN) -11491 + (LL) 996
1D Compatibility (HY) -15200 + (ID) 5150
Total energy: -211641.0 ( -102.99 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTL-query.scw
PDB file :
Tito_Scwrl_2ZTL.pdb
: