Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLLVTGGAGFIGTNFVHSAVREHPDDA-VTVLDALTYAGRRESLADV--EDAIRLVQGDITDAELVSQLVA--ESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRH---------G-VRLHHISTDEVYGDLELDD-------RARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGRTYLISSEGERDNLTVLRTLLRLMDRDPDD-------FDHVTDRVGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRTTIDWYRDNESWWRPLKDATEARYQERGQ |
| 1KEW Chain:A ((1-352)) | MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPL-ETFESGIRKTVEWYLANTQWVNNVKSGAYQSW----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126864 for 2818 contacts (-45.0/contact) +
2D Compatibility (PS) -34710 + (NN) -17717 + (LL) 220
1D Compatibility (HY) -29600 + (ID) 7300
Total energy: -215971.0 ( -76.64 by residue)
QMean score : 0.460
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