Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG |
3TZF Chain:A ((19-278)) | ------QVMGILNVTPDSFSDGGCHNNLDQALQHAQRMLSAGATLIDIGGESTRPGAAEVSEQEELDRVVPVVEALAQRFDVWLSVDTSKAAVITESAHAGAHLINDIRSLQ-EPGALEAAAKTGLPVCLMHMQGQPKNMQHSPY-YDDLMTDINRFFQHHIERCVAAGIAKNKLLLDPGFGFGKNLAHNYQLLAHLSELHHFELPLLVGMSRKSMVGQLLN------VPPQQRVIGSVACAVIAAMQGAQIIRVHDVKETVEAMCIVEATRSA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129483 for 2224 contacts (-58.2/contact) +
2D Compatibility (PS) -29580 + (NN) -25171 + (LL) 684
1D Compatibility (HY) -20800 + (ID) 5250
Total energy: -209600.0 ( -94.24 by residue)
QMean score : 0.514
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