Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGA---NLFELENFVAREVDVAPAASGAPHAAGGRL
3BVF Chain:A ((14-180))
----PMLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRK-------------
General information:
TITO was launched using:
RESULT:
Template:
3BVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54452 for 1262 contacts (-43.1/contact) +
2D Compatibility (PS) -18510 + (NN) -16168 + (LL) 812
1D Compatibility (HY) -8800 + (ID) 1500
Total energy: -98618.0 ( -78.14 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3BVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BVF-query.scw
PDB file :
Tito_Scwrl_3BVF.pdb
: