Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MSRFEIAFSGQLVAGARPEVVKANLAKLFQADAQRIELLFSGRRVVIKNNLDAASAEKYRSVLERA---GAIAVVAEMEVEEVVMAP----------------PPAQTTPVEAPQTRAA----TGTSAPAGRLQVAPRDGYMAAFAEVDAPDFGLAP----VGADLQDAKAE-AEAPKLDLSRFSVAPV---GSDMGQARSEPA----APAPDTSHLRLQD |
| 3DU1 Chain:X ((0-236)) | HMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAILWGIDLSEADLYRAILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLDGAKLCRANFGRTIQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 77631 for 1453 contacts (53.4/contact) +
2D Compatibility (PS) -17634 + (NN) -1369 + (LL) 572
1D Compatibility (HY) 10800 + (ID) 400
Total energy: 69600.0 ( 47.90 by residue)
QMean score : -0.029
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