Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRF-FWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPE-SNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN
3SZT Chain:A ((5-237))
----REGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDF-QENRFFWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPR-IVPESNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN
General information:
TITO was launched using:
RESULT:
Template:
3SZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142624 for 1785 contacts (-79.9/contact) +
2D Compatibility (PS) -24867 + (NN) -13564 + (LL) 604
1D Compatibility (HY) -34800 + (ID) 11200
Total energy: -226451.0 ( -126.86 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_3SZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SZT-query.scw
PDB file :
Tito_Scwrl_3SZT.pdb
: