Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLTLRPAGVDDLSALVELEN-RCFDYDRLSRRNFQWMLT-RAHASLTVAEG--DGGVLGYALVLFHEGTSLARLYSIAIDPRARGIGLGQKLLEAAEQAARDNDRAYMRLEVRPDNRGAIALYERNGYRPFATVRDYYEDHSEALRFEKRIRNPGHDQRRHVPFYRQTTDFTCGPACLLMAMGALQPERQLTRREELRLWREATTIYMTAGHGGCSPQGLALAAWRRGFRVKLVLSAGGPLFLDGVRNEDKKAVMRLVHEDFCEELDASGVEQKRSARLDIPRQLARGGQPLVLISSYRLTRSKAPHWVLVTHYDEDFVYLHDPDVDHSQHRQPLDCQHIPVSHAEFDKMSRFGRSKLRAAVILFNPE |
3LOD Chain:A ((-1-152)) | AMYTITDIAPTDAEFIALIAALDAWQET-------LDLSQLPPQTVIALAIRSPQGEAVGCGAIVLSEE-GFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFAPYQPD-PLSVFMEKPLF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48684 for 973 contacts (-50.0/contact) +
2D Compatibility (PS) -15289 + (NN) -6983 + (LL) 14668
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -64138.0 ( -65.92 by residue)
QMean score : 0.525
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