Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITGIQPGGQLTTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIVYDHIHTAELQQRPFTLKG--------DSGTYTCDALIIATGASAQYLGMSSEEAFMGKGVSACATCDGFFYRNQVVCVVGGGNTAVEEALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGVTGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQGQLEM-RDGYLRIHGGSEGNATQTSIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH |
| 4YKF Chain:A ((229-515)) | ----------------------IYSARKGIR-TGLMGERFGGQILDTVDIENYIS-VPKTEGQKLAGALKVHVDEYDVDVI-DSQSASKLI--PAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLK---NVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCE-----TNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170053 for 2164 contacts (-78.6/contact) +
2D Compatibility (PS) -30168 + (NN) -11116 + (LL) 1212
1D Compatibility (HY) -18800 + (ID) 4700
Total energy: -233625.0 ( -107.96 by residue)
QMean score : 0.410
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