Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARVESTLDKHAFLEALSEAGYPEGR
2K2P Chain:A ((22-85))
AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTPE-
General information:
TITO was launched using:
RESULT:
Template:
2K2P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26048 for 451 contacts (-57.8/contact) +
2D Compatibility (PS) -6726 + (NN) -5123 + (LL) 100
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -42047.0 ( -93.23 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2K2P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K2P-query.scw
PDB file :
Tito_Scwrl_2K2P.pdb
: