Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDGPLSSPFGLRRFFN-------GEERNPHSGLDFAV------PAGTPIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKIDVKLGQQVPRGGVLGK--------VGATGRATGPHMHWNVSLNDARVDPA-IFIGAFQP-------------------------------------- |
| 3IT5 Chain:A ((1-182)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------APPSNLMQLPWRQGYSWQPNGAHSNTGSGYPYSSFDASYDWPRWGSATYSVVAAHAGTVRVLS-----RCQVRVTHPSGWATNYYHMDQIQVSNGQQVSADTKLGVYAGNINTALCEGGSSTGPHLHFSLLYNGAFVSLQGASFGPYRINVGTSNYDNDCRRYYFYNQSAGTTHCAFRPLYNPGLAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52326 for 875 contacts (-59.8/contact) +
2D Compatibility (PS) -13155 + (NN) -2656 + (LL) 10292
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -65495.0 ( -74.85 by residue)
QMean score : 0.541
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