Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIA-----PARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS----SIFYNRVKGELEQALQEQGWPQLTIARPSLLFG------------------------------PREEFRLAEILAAPIARILPGKYHGI---------EACDLARALWRLALEEGKGVRFVESDELRKLGK------------------------------------------------------------------- |
1K6I Chain:A ((3-352)) | --QQKKTIAVVNATGRQAASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGD-------EIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLP-STFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRVTDEARKLWSGWRDMEEYAREVFPIEEEANGLDWML |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1K6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102353 for 1516 contacts (-67.5/contact) +
2D Compatibility (PS) -21818 + (NN) -758 + (LL) 1292
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -130287.0 ( -85.94 by residue)
QMean score : 0.417
|
|
|