Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAES----GVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPA---PG--------------NGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAG-EISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLA-----YGK-----VLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD |
| 2AGT Chain:A ((16-304)) | -------MPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCAP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144342 for 2154 contacts (-67.0/contact) +
2D Compatibility (PS) -28081 + (NN) -11785 + (LL) 664
1D Compatibility (HY) -21600 + (ID) 4850
Total energy: -209994.0 ( -97.49 by residue)
QMean score : 0.596
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