Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRSLLFALLATLLLVGGARAETDPDYSMVLLTE-NFPPYNMAINGKNFAQEDNIDGIAVDIVREMFKRAGIKYSLTLRF-PWDRIYKLALEKPGYGVFVTARLAEREDKFKWVGPIGPDDWVLLAKGDSPITLGSLDEAKKYRIGAYKGDAIAEFLGKNGFE-ADLAL-RDQENAQKLVKGQIDLWASGDPAGRYLAKQEGVTGLKTVLR--FNSDQLYLALNRETPDEVVQKLQAALDGMRKEGFVEDILNSYL |
3MPK Chain:A ((19-251)) | -------------AYSAREQQWMADHPVVKVAVLNLFAPFTLFR------TDEQFGGISAAVLQLLQLRTGLDFEIIG-VDTVEELIAKLRSGEADMAGALFVNSARESFLSFSRPYVRNGMVIVTRQDPD-APVDADHLDGRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNRYFAGKLRIASALDLPPAEIALATTRGQ-TELMSILNKALYSISN-DELASIISRWR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108749 for 1844 contacts (-59.0/contact) +
2D Compatibility (PS) -24254 + (NN) -9270 + (LL) 2028
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -147245.0 ( -79.85 by residue)
QMean score : 0.440
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