Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHDYIVKALAFDGEIRAYAALTTETVQEAQTRHYTWPTASAAMGRTMTATAMMGAMLKGDQKLTVTVDGQGPIGRIIADANAKGEVRAYVDHPQTHFPLNEQGKLDVRRAVGTNGSIIVVKDVGMKDYFSGASPIVSGELGEDFTYYYATSEQT-PSSVGLGVLVNPDNTIKAAGGFIIQVMPGAKDETISKLEKAISEMT-PVSKLIEQGLTPEGLLNEILGEDHVQILEKMPVQFECNCSHEKFLNAIKGLGEAEIQNMIKEDHGAEAVCHFCGNKYKYTEEELNVLLESLA- |
| 4CRU Chain:B ((4-273)) | MLEREKIYQWINE---LSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINP--PTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVS----KTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD--------DTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKD---------TTFAQVLKDDTTTKRWLAQLVKNLQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38503 for 2145 contacts (-18.0/contact) +
2D Compatibility (PS) -28076 + (NN) -2888 + (LL) 2228
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -74089.0 ( -34.54 by residue)
QMean score : 0.258
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