Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLTHLNEENQPKMVDIGDKETTERIALASGRISMNKEAYDAIINHGVKKGPVLQTAIIAGIMAAKKTSELIPMCHPIMLNGVDIDILEEKETCSFKLYARVKTQAKTGVEMEALMSVSIGLLTIYDMVKVIDKSMTISGVMLEHKSGGKSGDYNAKK
2IIH Chain:A ((10-155))
----------RPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKAEKRVRIEATVKTKAETGVEMEAMTACAVAALTVYDMLKAASKGLVISQVRLLHKAGGKSGEWRR--
General information:
TITO was launched using:
RESULT:
Template:
2IIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82595 for 1157 contacts (-71.4/contact) +
2D Compatibility (PS) -15630 + (NN) -2363 + (LL) 692
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -113196.0 ( -97.84 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2IIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IIH-query.scw
PDB file :
Tito_Scwrl_2IIH.pdb
: