Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITGERIYLRPFQIIDANQKLAFHLANKAFFEGYSMERDDRFYTIEEQQSLISRLEDFAASDVEYYYGIFLNDTDELIGTINLFSILRESLQSAFIGYFLDKKHNGNGYATEAVQLIVDFGFDILGLHRIEAGVMPKNERSKQVLLKAGFHLEGLAVQNVRI-NGTWEDHQVLAIINPGD
2Z10 Chain:A ((7-176))
-RFEGRHVRLEPLALAHLPAFLRHY-D-PEV-YRFLSRAP-VAPTEEALRAHLEGLLG---EPGRVNWAILF--GKEVAGRISVIAPE-PEHAKLELGTMLFKPFWGSPANKEAK-LLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVLRKNRRLPDGAFRDDVVYSVLKEEW
General information:
TITO was launched using:
RESULT:
Template:
2Z10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62774 for 1241 contacts (-50.6/contact) +
2D Compatibility (PS) -17844 + (NN) -3090 + (LL) 844
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -89064.0 ( -71.77 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_2Z10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z10-query.scw
PDB file :
Tito_Scwrl_2Z10.pdb
: