Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKGLLDFLVNIASTPAILVALIAIIGLVLQKKGVPDIVKGGIKTFVGFLVVSGG------AGIVQNSLNPFGKMFEHAFHLVGVVPNNEAIVAVALTKYG---SATALIMLAGMIFNILIARFTKFKYIFL--TGHHTLYMACMIAVIFAVAGFTSFSLILFGGL--ALGIIMSVSPAFVQKY-MIQLTGNDKVALGHFGSL----GYWLSGFIGGIVGDKSKSTEDIKFPKSLSFLRDSTVSITISMAIIYLIVAVF------AGEAYIAKEISNGVN-------GLVYALQLAGQFAAGVFVILAGVRLILGEIV-----------PAFKGISEKLVPNSKPALDCPIVYPYA--PNAVLIGFISSFVGGLVSMIVMIVTGTTVIL--------------------------PGVVPHFFCGATAGVIGNASGGVRGA-TIGAFV-----QGILISFLPIFLMPVLGGLGFK----GSTFSDADFG-LTGIILGALNHVGGAIAIVIGIVVILIGLFGISFVGKSTHKEG-------- |
| 4U1C Chain:C ((6-549)) | QEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -365531 for 3159 contacts (-115.7/contact) +
2D Compatibility (PS) -45639 + (NN) -2327 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -432247.0 ( -136.83 by residue)
QMean score : 0.204
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