Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMGF--GLDILKMDKR------PQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQIL------LTR------DV--VVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNG-QMILMNGANPRDILK-VLDGHNIGTYFAQGK |
| 2BTY Chain:A ((18-280)) | ----EFYGKTFVIKFGGSAMKQEN------AKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNP-EILHALIENDYIPVIAP---VGIGED-GHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLK-DG------KLISTLTPDE--AEELI---RDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKELE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142500 for 1977 contacts (-72.1/contact) +
2D Compatibility (PS) -25562 + (NN) -6304 + (LL) 464
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -185902.0 ( -94.03 by residue)
QMean score : 0.479
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