Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MKMKKWFGLLFL--------GLALITLAACGQKT----PEDIIKTELKDSYVGYSENPGSDYPFNDGDDVLTFNKKENSITNSQGQMTYFSVIPKEEVPAGTQRVIDEL-ETKLKGTNNFTIIINSTVKNPTKKDSEGAYQIALSDSGKAIRIFELGREPRSFGYYDFSGKAK------------------------ |
| 4TVS Chain:A ((8-231)) | VETTAVQEFQNQMNQLKNKYQGQDEKLWKRSQTFLEKHLNSSHPRSQPAILLLTAARDAEEALRCLSEQIADAYSSFRSVRAIRIDGTDKATQDSDTVKLEVDQELSNGFKNGQ-NAAVVHRFESFPAGSTLIFYKYCDHENAAFKDVALVLTVLLEEETLGTSLGLKEVEEKVRDFLKVKFTNSNTPNSYNHMDPDKLNGLWSRISHLVLPVQPENALKRGICL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17443 for 1166 contacts (15.0/contact) +
2D Compatibility (PS) -17205 + (NN) -10438 + (LL) 208
1D Compatibility (HY) 1600 + (ID) 1350
Total energy: -9742.0 ( -8.36 by residue)
QMean score : 0.221
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