Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MTISNQELTLTPLRGKSGKAYIGTYPNGERVFVKY-NTTPILPALAKEQIAPQLLWARR--------TSNGDMMSAQEWLDGRTLTKEDMG----------SKQIIHILLRLHKSRPLVNQLLQLGYKIENPYDLLMDWEKQTPIQIRENTYLQSIVTELKRSLPEFRTEVAT------IVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHY---IPQKHWKDWLSYYGYKDNEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
| 3HAM Chain:A ((1-299)) | MVNLDAEIYEHLNKQIKINELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKREFELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYERKDREMLIKGVSELL---QTQAEMFIF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78348 for 1876 contacts (-41.8/contact) +
2D Compatibility (PS) -27280 + (NN) -1527 + (LL) 296
1D Compatibility (HY) -10000 + (ID) 2200
Total energy: -119059.0 ( -63.46 by residue)
QMean score : 0.275
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