Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIIIIGAQASGKMTIGQEIAKQTGMTLFHNHDSIDFVLRFMPW-SP---DSI----ALTESIRFKFFETFAK---TGQKMIFTIVIDFNDSRDVVFLEKIQTVFQSHNQ-EVLFVELETELSERLKRNRTENRLKHKPSKRDIKWSENDICLTMDYAIFNPEVAPEALTYYHKINNTCLTATETAYLIIQKINQIKEKN |
| 2CDN Chain:A ((23-200)) | --VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSV-----EQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRGRADDTD-----DVILNRMKVYRDETAPL---LEYYRDQLKTVDAVG-TMDEVFARALRALGK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77350 for 1238 contacts (-62.5/contact) +
2D Compatibility (PS) -17419 + (NN) -478 + (LL) 1392
1D Compatibility (HY) -400 + (ID) 750
Total energy: -95005.0 ( -76.74 by residue)
QMean score : 0.438
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