Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNG--SIIPGLSRFV--AGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGS-RDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI
2YV5 Chain:A ((74-230))------------------------------------------------------------------RPKVANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEE-KKELERWISIY-RDA---GYDVLKVSAKTGEGIDELVDYLE----GFICILAGPSGVGKSSILSRLTGEELRTQEV---------TTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREVRNYFREFLRYQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78367 for 1087 contacts (-72.1/contact) +
2D Compatibility (PS) -15206 + (NN) -2074 + (LL) 10884
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -94413.0 ( -86.86 by residue)
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_2YV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YV5-query.scw
PDB file : Tito_Scwrl_2YV5.pdb: