Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNG--SIIPGLSRFV--AGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGS-RDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
2YV5 Chain:A ((74-230)) | ------------------------------------------------------------------RPKVANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEE-KKELERWISIY-RDA---GYDVLKVSAKTGEGIDELVDYLE----GFICILAGPSGVGKSSILSRLTGEELRTQEV---------TTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREVRNYFREFLRYQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78367 for 1087 contacts (-72.1/contact) +
2D Compatibility (PS) -15206 + (NN) -2074 + (LL) 10884
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -94413.0 ( -86.86 by residue)
QMean score : 0.466
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