Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENIIEINYNQTGKSKKTNEYGMREMQARAFEKR-NSQYLLVKAPPASGKSRALMFIGLDKLINQGLRKVIVAVPERSIGSSFKNTDLKSYGFFENWKVDPRNNLTVGGDN-SKVKSFVRFM---ESDDQVLICTHSTLRFAFEKI---D--DKAFDNCLLAIDEFHHVSADV--NSRLGELLRSIIH-NSSAHIVAMTGSYFRGDSVPILLPEDEELFDKVTYSYYEQLDGYEYLKGFGIGYHFYQ-----GQYTSAINEVL---DTNKKTIVHIPNVNSGESTKDKYDEVGKILDMIGEVEYQDDDTGIIYVKRHSDGKTLKIADLVDD--QVGRENVVAYLRNIEALDDLDIIIALGMAKEGFDWPFCEHTLTVGYRGSLTEIVQIIGRCTRDSYNKTYAQFTNLIAMPDAKDEVVTYTVNTMLKAISASLLMEQVLTPDFKFKRRRNESEKSSTTGELFVKGLKEPSTENVKKIIENDINDLKAKIMQDSQVQKTFSGEVDPKVLNKVLIPKVIQKVYPNLSDEEIEEVRQHVVLDTVMKGAKSEVVGSKEFIRMADKFINIEDLDINLIDSINPFQKAFEVLSKELNSPVLKLIQETIDAKRINFDEDELVFIWPKV
2V1X Chain:A ((45-372))----------------------FRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCS-----DGFTLVICPLISLMEDQLM-VLKQLGISA--------TMLNASSSKEHVKWVHAEMVNKNSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIGLTATATNHVLTDAQKILCIEK--CFTFTASF--------NRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDS-------EQVTVSLQNLG----------I------------HAGAYHANLEPEDKTTVHRKWSA----NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDM-KADCIL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2V1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1514 -187791 -124.04 -621.82
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -124.04
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.351

(partial model without unconserved sides chains):
PDB file : Tito_2V1X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2V1X-query.scw
PDB file : Tito_Scwrl_2V1X.pdb: