Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIFAHRGASGQFPENTMLAFEKGI-EAGADGIELDVQLTKDGRIVVIHDERLNRTTSLKGFVKDTAYDEVKTANAAAGHDQ--------AYSDIKVPLLEDVLSWAVKKDFLINIELKNSVIRYEGMEEKVL-EAVKRFNV-------EDRVILSTFNHDSLALCARLAPHIERAVLTSD--VLYQA-DRYI-ASIPASGYHPKINSPGVTDEVLKKMR-NGLIKVRPYTVNRPEDMKRLIEAGADGMFTDFPEKASALLKNE
2OOG Chain:A ((23-279))RFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGP-NANYYIETKSPDV-YPGMEE-QLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDY--TDLTEQNTHHLKDLG-FIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK--


General information:
TITO was launched using:
RESULT:

Template: 2OOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1186 57580 48.55 245.02
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 48.55
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2OOG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OOG-query.scw
PDB file : Tito_Scwrl_2OOG.pdb: