Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPVNVISVAVVASDPLTRDGALARLSSHRELDVRAWQAGCETSVLLVLATTITAPLLCQIEDVQKDGPSHAPKLVVVADEFSAEQVFRMIKLGLTGLLYRSQSTFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLADGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI--
1FSE Chain:A ((8-74))
------------------------------------------------------------------------------------------------------------------------------------------------SKP--LLTKREREVFELLVQDKTTKEIASELFISEKTVRNHISNAMQKLGVKGRSQAVVELLRMGELEL
General information:
TITO was launched using:
RESULT:
Template:
1FSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66068 for 449 contacts (-147.1/contact) +
2D Compatibility (PS) -7032 + (NN) -3187 + (LL) 11692
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -68745.0 ( -153.11 by residue)
QMean score : 0.857
(partial model without unconserved sides chains):
PDB file :
Tito_1FSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FSE-query.scw
PDB file :
Tito_Scwrl_1FSE.pdb
: