Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTALQLPLSVVLIDAGERMARQERLARATPAGRATGATIDASTKVVIAPVVSLAVA
2B5A Chain:A ((7-75))
----IKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKMEE---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30311 for 483 contacts (-62.8/contact) +
2D Compatibility (PS) -7234 + (NN) -2165 + (LL) 4280
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -38880.0 ( -80.50 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_2B5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5A-query.scw
PDB file :
Tito_Scwrl_2B5A.pdb
: