Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPASTSSTGGHALATLLGNHGVEVVVADSIADVEAAARPDSLLLVAQTQYLVDNALLDRLAKAPGDLLLVAPTSRTRTALTPQLRIAAASPFNSQPNCTLREANRAGSVQWGPSDTYQATGDLVLTSCYGGALVRFRAEGRTITVVGSSNFMTNGGLLPAGNAALAMNLAGNRPRLVWYAPDHIEGEMSSPSSLSDLIPEN--VHWTIWQLWLVVLLVALWKGRRIGPLVAEELPVVIRASETVEGRGRLYRSRRARDRAADALRTATLQRLRPRLGVGAGAPAPAVVTTIAQRSKADPPFVAYHLFGPAPATDNDLLQLARALDDIERQVTHS |
1K4I Chain:A ((12-227)) | ------------------------F---DAIPDVIQAFKNGEFVVVLD----------DPSRENEADLIIAAESV-------TTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADP---------------RGTAYTVSVDAEHPSTTTG--ISAHDRALACRMLAA--------PDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLA-GKRPVAVISE----IVDDGQEVEGRAVRAAPGMLRGDECVAFARRW---------------------------------------------GLKVCTIEDMIAHVEKTEGKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69951 for 1742 contacts (-40.2/contact) +
2D Compatibility (PS) -23350 + (NN) -9435 + (LL) 7756
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -103130.0 ( -59.20 by residue)
QMean score : 0.247
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