Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTDVARLLALRSFTE-------------LGARQRARALLDAGSFRELLDPFAGVQ-------SPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQ-PVVAVIAGPVGCFGGMSIAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
| 2F9I Chain:B ((26-285)) | PAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENR-----LPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTG-GVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPDDFQT--------AEFLLEHGQLDKVV--HRNDMRQTLSEILKIHQEVTK--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121489 for 1873 contacts (-64.9/contact) +
2D Compatibility (PS) -25944 + (NN) -10075 + (LL) 2504
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -165054.0 ( -88.12 by residue)
QMean score : 0.383
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