Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLLSSKRQVSEKGKGWSPVKIRTQDKAPPPLPPLVVFNHLAPPSPNQDPDEEERFVVALFDYAAVNDRDLQVLKGEKLQVLRSTGDWWLARSLVTGREGYVPSNFVAPVETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLPCVNLAPKNLWAQDEWEIPRQSLKLVRKLGSGQFGEVWMGYYK-------NNMKVAIKTLKEGTMSPE--AFLGEANVMKTLQHERLVRLYAVVT-REPIYIVTEYMARGCLLDFLKTDE-----GSRLSLPRLIDMSAQVAEGMAYIERMNSIHRDLRAANILVS-----ETLCCKIADFGLARII-DSEYTAQEGAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYNDIITECWRGRPEERPTFEFLQSVLEDFYTATEGQYELQP |
| 3ZBF Chain:A ((29-308)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFPREKLTLRLLLGS---GEVYEGTAVDILGVGSGEIKVAVKTLKKGSTDQEKIEFLKEAHLMSKFNHPNILKQLGVCLLNEPQYIILELMEGGDLLTYLRKARMATFYGPLLTLVDLVDLCVDISKGCVYLERMHFIHRDLAARNCLVSVKDYTSPRIVKIGDFGLARDIY-----------LPVRWMAPESLMDGIFTTQSDVWSFGILIWEILTLGHQPYPAHSNLDVLNYVQTGGRLEPPRNCPDDLW-NLMTQCWAQEPDQRPTFHRIQDQLQLF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191728 for 1903 contacts (-100.8/contact) +
2D Compatibility (PS) -25895 + (NN) -9245 + (LL) 14972
1D Compatibility (HY) -25600 + (ID) 5400
Total energy: -242896.0 ( -127.64 by residue)
QMean score : 0.251
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