Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
2GF0 Chain:A ((7-177))
-NDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLN------------------
General information:
TITO was launched using:
RESULT:
Template:
2GF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94594 for 1339 contacts (-70.6/contact) +
2D Compatibility (PS) -18995 + (NN) -8505 + (LL) 524
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -140320.0 ( -104.79 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_2GF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GF0-query.scw
PDB file :
Tito_Scwrl_2GF0.pdb
: