Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FIFLALLGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN
3T25 Chain:A ((1-223))
--------------------IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN
General information:
TITO was launched using:
RESULT:
Template:
3T25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143412 for 1914 contacts (-74.9/contact) +
2D Compatibility (PS) -24416 + (NN) -12924 + (LL) 1536
1D Compatibility (HY) -30800 + (ID) 11150
Total energy: -221166.0 ( -115.55 by residue)
QMean score : 0.821
(partial model without unconserved sides chains):
PDB file :
Tito_3T25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T25-query.scw
PDB file :
Tito_Scwrl_3T25.pdb
: